Bacterial Pangenomics Methods and Protocols /
| Korporativní autor: | |
|---|---|
| Další autoři: | , , |
| Shrnutí: | X, 268 p. 59 illus., 42 illus. in color. text |
| Jazyk: | angličtina |
| Vydáno: |
New York, NY :
Springer US : Imprint: Humana,
2021.
|
| Vydání: | 2nd ed. 2021. |
| Edice: | Methods in Molecular Biology,
2242 |
| Témata: | |
| On-line přístup: | https://doi.org/10.1007/978-1-0716-1099-2 |
| Médium: | Elektronický zdroj Kniha |
Obsah:
- PacBio-Based Protocol for Bacterial Genomes Assembly
- The Illumina Sequencing Protocol and the NovaSeq 6000 System
- Comparative Analysis of Core and Accessory Genes in Co-Expression Network
- Inferring Core Genome Phylogenies for Bacteria
- Inferring Phylogenomic Relationship of Microbes Using Scalable Alignment-Free Methods
- Fast Phylogeny Reconstruction from Genomes of Closely Related Microbes
- Comparative Genomics, from the Annotated Genome to Valuable Biological Information: A Case Study
- Accurate Annotation of Microbial Metagenomic Genes and Identification of Core Sets
- Metagenomic Assembly: Reconstructing Genomes from Metagenomes
- Genome Recovery, Functional Profiling, and Taxonomic Classification from Metagenomes
- Functional Metagenomics for Identification of Antibiotic Resistance Genes (ARGs)
- Host Trait Prediction from High-Resolution Microbial Features
- Phylogenetic Methods for Genome-Wide Association Studies in Bacteria
- Simple, Reliable, and Time-Efficient Manual Annotation of Bacterial Genomes with MAISEN
- A Compendium of Bioinformatic Tools for Bacterial Pangenomics to Be Used by Wet-Lab Scientists
- A Protocol for Teaching Basic Next Generations Sequencing (NGS) Analysis Skills to Undergraduate Students Using Bash and R.