Bacterial Pangenomics Methods and Protocols /

Λεπτομέρειες βιβλιογραφικής εγγραφής
Συγγραφή απο Οργανισμό/Αρχή: SpringerLink (Online service)
Άλλοι συγγραφείς: Mengoni, Alessio (Επιμελητής έκδοσης), Bacci, Giovanni (Επιμελητής έκδοσης), Fondi, Marco (Επιμελητής έκδοσης)
Περίληψη:X, 268 p. 59 illus., 42 illus. in color.
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Γλώσσα:Αγγλικά
Έκδοση: New York, NY : Springer US : Imprint: Humana, 2021.
Έκδοση:2nd ed. 2021.
Σειρά:Methods in Molecular Biology, 2242
Θέματα:
Διαθέσιμο Online:https://doi.org/10.1007/978-1-0716-1099-2
Μορφή: Ηλεκτρονική πηγή Βιβλίο
Πίνακας περιεχομένων:
  • PacBio-Based Protocol for Bacterial Genomes Assembly
  • The Illumina Sequencing Protocol and the NovaSeq 6000 System
  • Comparative Analysis of Core and Accessory Genes in Co-Expression Network
  • Inferring Core Genome Phylogenies for Bacteria
  • Inferring Phylogenomic Relationship of Microbes Using Scalable Alignment-Free Methods
  • Fast Phylogeny Reconstruction from Genomes of Closely Related Microbes
  • Comparative Genomics, from the Annotated Genome to Valuable Biological Information: A Case Study
  • Accurate Annotation of Microbial Metagenomic Genes and Identification of Core Sets
  • Metagenomic Assembly: Reconstructing Genomes from Metagenomes
  • Genome Recovery, Functional Profiling, and Taxonomic Classification from Metagenomes
  • Functional Metagenomics for Identification of Antibiotic Resistance Genes (ARGs)
  • Host Trait Prediction from High-Resolution Microbial Features
  • Phylogenetic Methods for Genome-Wide Association Studies in Bacteria
  • Simple, Reliable, and Time-Efficient Manual Annotation of Bacterial Genomes with MAISEN
  • A Compendium of Bioinformatic Tools for Bacterial Pangenomics to Be Used by Wet-Lab Scientists
  • A Protocol for Teaching Basic Next Generations Sequencing (NGS) Analysis Skills to Undergraduate Students Using Bash and R.